G = mentored graduate student, U = mentored undergraduate student, P = mentored postdoctoral researcher

In press

Carey, C.C., W.M. WoelmerG, M.E. LoftonG, R.J. Figueiredo, B.J. Bookout, R.S. CorriganG, V. DaneshmandG, A.G. HounshellP, D.W. Howard1, A.S.L. LewisG, R.P. McClureG, H.L. WanderG, N.K. WardG, R.Q. Thomas. Advancing lake and reservoir water quality management with near-term, iterative ecological forecasting. In press at Inland Waters. DOI: 10.1080/20442041.2020.1816421

McClure, R.P.G, M.E. Schreiber, M.E. Lofton, S. Chen, K.M. Krueger, and C.C. Carey. Ecosystem-scale oxygen manipulations alter terminal electron acceptor pathways in a eutrophic reservoir. In press at Ecosystems. DOI: 10.1007/s10021-020-00582-9


Ladwig, R., P.C. Hanson, H.A. Dugan, C.C. Carey, Y. Zhang, L. Shu, C.J. Duffy, and K.M. Cobourn. 2021. Lake thermal structure drives inter-annual variability in summer anoxia dynamics in a eutrophic lake over 37 years. Hydrology and Earth System Sciences. 25: 1009-1032. DOI: 10.5194/hess-25-1009-2021 <Ladwig_etal_2021_HESS>

Howard, D.W.U, A.G. HounshellP, M.E. LoftonG, W.M. WoelmerG, P.C. Hanson, and C.C. Carey. 2021. Variability in fluorescent dissolved organic matter concentrations across diel to seasonal time scales is driven by water temperature and meteorology in a eutrophic reservoir. Aquatic Sciences. 83: 30. DOI: 10.1007/s00027-021-00784-w <Howard_etal_2021_AS>

Yang, B., M. Wells, B. McMeans, H. Dugan, J. Rusak, G. Weyhenmeyer, J.A. Brentrup, A. Hrycik, A. Laas, R. Pilla, J. Austin, P. Blanchfield, C.C. Carey, M. Guzzo, N. Lottig, M. Mackay, T. Middel, D. Pierson, J. Wang, and J. Young. 2021. A new thermal categorization of ice-covered lakes. Geophysical Research Letters. 48: e2020GL091374. DOI: 10.1029/2020GL091374 <Yang_etal_2021_GRL>

Cottingham, K.L., K.C. Weathers, H.A. Ewing, M.L. Greer, and C.C. Carey. 2021. Predicting the effects of climate change on freshwater cyanobacterial blooms requires consideration of the complete cyanobacterial life cycle. Journal of Plankton Research. 43: 10-19. DOI: 10.1093/plankt/fbaa059 <Cottingham_etal_2021_JPR>

Hounshell, A.G.P, R.P. McClureG, M.E. LoftonG, and C.C. Carey. 2021. Whole-ecosystem oxygenation experiments reveal substantially greater hypolimnetic methane concentrations and global warming potential in reservoirs during anoxia. Limnology and Oceanography-Letters. 6: 33-42. DOI: 10.1002/lol2.10173 <Hounshell_etal_2021_L&OL>

Farrell, K.J.P, K.C. Weathers, S. Sparks, J.A. Brentrup, C.C. Carey, M.C. Dietze, J. Foster, K. Grayson, J. Matthes, and M. SanClements. 2021. Training macrosystems scientists requires both interpersonal and technical skills. Frontiers in Ecology and the Environment. 19: 39-46. DOI: 10.1002/fee.2287 Farrell_etal_2021_FEE

Brentrup, J.A., D.C. Richardson, C.C. Carey, N.K. WardG, D.A. Bruesewitz, and K.C. Weathers. 2021. Under-ice respiration rates shift the annual carbon cycle in an oligotrophic lake from net autotrophy to net heterotrophy. Inland Waters. 11: 114-123. DOI: 10.1080/20442041.2020.1805261 <Brentrup_etal_2021_IW>

Man, XG, C. Lei, C.C. Carey, and J.C. Little. 2021. Relative performance of 1-D versus 3-D hydrodynamic, water-quality models for predicting water temperature and oxygen in a shallow, eutrophic, managed reservoir. Water. 13(1), 88. DOI: 10.3390/w13010088 <Man_etal_2021_Water>


Carey, C.C., K.J. FarrellP, A.G. HounshellP, and K. O’Connell. Macrosystems EDDIE teaching modules significantly increase ecology students’ proficiency and confidence working with ecosystem models and use of systems thinking. Ecology & Evolution. 10: 12515–12527. DOI: 10.1002/ece3.6757 <Carey_etal_2020_E&E>

Thomas, R.Q, R.J. Figueiredo, V. Daneshmand, B.J. Bookout, L. Puckett, and C.C. Carey. A near-term iterative forecasting system successfully predicts reservoir hydrodynamics and partitions uncertainty. Water Resources Research. 56, e2019WR026138. DOI: 10.1029/2019WR026138 <Thomas_etal_2020_WRR>

Lofton, M.E.G, T.H. Leach, B.E. Beisner, and C.C. Carey. 2020. Relative importance of top-down versus bottom-up control of lake phytoplankton vertical distributions varies among fluorescence-based spectral groups. Limnology and Oceanography. 65: 2485-2501. DOI: 10.1002/lno.11465 <Lofton_etal_2020_L&O>

Daw, A., R.Q. Thomas, C.C. Carey, J.S. Read, A.P. Appling, and A. Karpatne. 2020. Physics-guided architecture (PGA) of neural networks for quantifying uncertainty in lake temperature modeling. Proceedings of the 2020 SIAM International Conference on Data Mining. 532-540. DOI: 10.1137/1.9781611976236.60. <Daw_etal_2020>

Stachelek, J., W. Weng, C.C. Carey, A. Kemanian, K.M. Cobourn, T. Wagner, K.C. Weathers, and P.A. Soranno. 2020. Agricultural land-use and lake water quality relationships differ when considering predictor granularity at macroscales. Ecological Applications. 30: e02187.DOI: 10.1002/eap.2187 <Stachelek_etal_2020_EA>

Henson, V.R, K.M. Cobourn, K.C. Weathers, C.C. Carey, K.J. FarrellP, J.L. Klug, M.G. Sorice, N.K. WardG, and W. WengG. 2020. A practical guide for managing interdisciplinary teams: lessons learned from Coupled Natural and Human Systems (CNHS) research. Social Science. 119: 9. DOI: 10.3390/socsci9070119 <Henson_etal_2010_SocialSci>

Krueger, K.M.G, C.E. VavrusU, M.E. LoftonG, R.P. McClureG, P. Gantzer, C.C. Carey, and M.E. Schreiber. 2020. Iron and manganese fluxes across the sediment-water interface in a drinking water reservoir. Water Research. 182: 116003. DOI: 10.1016/j.watres.2020.116003 <Krueger_etal_2020_WR>

Ward, N.K.G, B.G. Steele, K.C. Weathers, K.L. Cottingham, H.A. Ewing, P.C. Hanson, and C.C. Carey. 2020. Differential responses of maximum and median chlorophyll-a to air temperature and nutrient load in a 31-year oligotrophic lake simulation. Water Resources Research. 56: e2020WR027296. DOI: 10.1029/2020WR027296 <Ward_etal_2020>

Hanson, P.C., A.B. Stillman, X. Jia, A. Karpatne, H.A. Dugan, C.C. Carey, J. Stachelek, N. WardG, Y. Zhang, J.S. Read, and V. Kumar. 2020. Predicting lake surface water phosphorus dynamics using process-guided machine learning. Ecological Modelling. 430: 109136. DOI: 10.1016/j.ecolmodel.2020.109136 <Hanson_etal_2020>

Farrell, K.J.P, N.K. WardG, A.I. KrinosU, V. DaneshmandG, R.J. Figueiredo, P.C. Hanson, and C.C. Carey. 2020. Ecosystem-scale nutrient cycling responses to increasing air temperatures vary with lake trophic state. Ecological Modelling. 430: 109134. DOI: 10.1016/j.ecolmodel.2020.109134 <Farrell_etal_2020_EcoMod_PDFA>

Ewing, H.A., K.C. Weathers, K.L. Cottingham, P.R. Leavitt, M.L. Greer, C.C. Carey, B.G. Steele, A.U. FiorilloU, and J.P. SowlesU. 2020. “New” cyanobacterial blooms are not new: two centuries of lake productivity are related to ice cover and land use. Ecosphere. 11(6):e03170. DOI: 10.1002/ecs2.3170 <Ewing_etal_2020_Ecosphere>

McClure, R.P.G, M.E. LoftonG, S. ChenG, J.C. Little, and C.C. Carey. 2020. The magnitude and drivers of methane ebullition and diffusion vary on a longitudinal gradient in a small freshwater reservoir. Journal of Geophysical Research-Biogeosciences. 125(3): e2019JG005205 DOI: 10.1029/2019JG005205 <McClure_etal_2020>

Hipsey, M.R., G. Gal, G.B. Arhonditsis, C.C. Carey, J.A. Elliott, M.A. Frassl, J.H. Janse, L. de Mora, and B.J. Robson. 2020. A system of metrics for the assessment and improvement of aquatic ecosystem models. 2020. Ecological Modelling and Software. 128: 104697. DOI: 10.1016/j.envsoft.2020.104697 <Hipsey_etal_2020>

Stockwell, J., J.P. DoubekG, R. Adrian, O. Anneville, C.C. Carey, L. Carvalho, L. de Senerpont Domis, G. Dur, M. Frassl, H.-P. Grossart, B. Ibelings, M. Lajeunesse, A. Lewandowska, M. Llames, S.S. Matsuzaki, E. Nodine, P. Noges, V. Patil, F. Pomati, K. Rinke, L. Rudstam, J. Rusak, N. Salmaso, C. Seltmann, D. Straile, S. Thackeray, W. Thiery, P. Urrutia-Cordero, P. Venail, P. Verburg, R. Woolway, T. Zohary, M. Andersen, R. Bhattacharya, J. Hejzlar, N. Janatian Ghadikolaei, T. Kpodonu, T. Williamson, and H. Wilson. 2020. Storm impacts on phytoplankton community dynamics in lakes. Global Change Biology. 26: 2756-2784. DOI: 10.1111/gcb.15033 <Stockwell_etal_2020>

Burford, M.A., C.C. Carey, D.P. Hamilton, J. Huisman, H.W. Paerl, S.A. Wood, and A. Wulff. 2020. Advancing the research agenda for improving understanding of cyanobacteria in a future of global change. Harmful Algae. 91:101591. DOI: 10.1016/j.hal.2019.04.004 <Burford_etal_2020_HarmfulAlgae>

Weng, W.G, K.J. Boyle, K.J. FarrellP, C.C. Carey, K.M. Cobourn, H. Dugan, P.C. Hanson, N.K. WardG, and K.C. Weathers. 2020. Coupling lake water quality and hedonic modeling to evaluate the effects of nutrient loading. Ecological Economics. 169:106556. <Weng_etal_2020_EcolEcon>


Doubek, J.P.G, K.L. CampbellU, M.E. LoftonG, R.P. McClureG, and C.C. Carey. Hypolimnetic hypoxia increases the biomass and compositional variability of crustacean zooplankton communities. Water. 11(10):2179. DOI: 10.3390/w11102179  <Doubek_etal_2019_Water.pdf>

WardG, N.K., L. Fitchett, J.A. HartG, L. Shu, J. Stachelek, W. Weng, Y. Zhang, H. Dugan, A. HetheringtonP, K. Boyle, C.C. Carey, K.M. Cobourn, P.C. Hanson, A.R. Kemanian, M.G. Sorice, and K.C. Weathers. 2019. Integrating fast and slow processes is essential for simulating human-freshwater interactions. Ambio. 1169-1182. DOI: 10.1007/s13280-018-1136-6 <Ward_etal2019_Ambio.pdf>

MungerG, Z.W., C.C. Carey, A.B. GerlingG, J.P. DoubekG, K.D. HamreG, R.P. McClureG, M.E. Schreiber. 2019. Oxygenation and hydrologic controls on iron and manganese mass budgets in a drinking water reservoir. Lake and Reservoir Management. 35:277-291. DOI: 10.1080/10402381.2018.1545811 <Munger_etal_2019_LRM.pdf>

Carey, C.C., N.K. WardG, K.J. FarrellP, M.E. LoftonG, A.I. KrinosU, R.P. McClureG, K. SubratieG, R.J. Figueiredo, J.P. DoubekG, P.C. Hanson, P. Papadopoulos, and P. Arzberger. 2019. Enhancing collaboration between ecologists and computer scientists: lessons learned and paths forward. Ecosphere. 10(5):e02753. DOI: 10.1002/ecs2.2753 <Carey_et_al-2019-Ecosphere.pdf>

Hipsey, M.R., L.C. Bruce, C. Boon, B. Busch, C.C. Carey, D.P. Hamilton, P.C. Hanson, J.S. Read, E. de Sousa, M. Weber, and L.A. Winslow. 2019. A General Lake Model (GLM 3.0) for linking with high-frequency sensor data from the Global Lake Ecological Observatory Network (GLEON). Geoscientific Model Development. 12: 473-523. DOI: 10.5194/gmd-12-473-2019 Open access at:

LoftonG, M.E., R.P. McClureG, S. ChenG, J.C. Little, and C.C. Carey. 2019. Whole-ecosystem experiments reveal varying responses of phytoplankton functional groups to epilimnetic mixing in a eutrophic reservoir. Water. 11(2):222. DOI: 10.3390/w11020222 Open access at:

DoubekG, J.P., C.C. Carey, M. LavenderG, A.K. WinegardnerG, M. BeaulieuG, P.T. KellyG, A.I. Pollard, D. Straile, and J.D. Stockwell. 2019. Calanoid copepod zooplankton density is positively associated with water residence time across the continental U.S. PLOS One. 14(1):e0209567. DOI: 10.1371/journal.pone.0209567 Open access at:

Henson, V.R., K.M. Cobourn, C.C. Carey, K.J. Boyle, M.G. Sorice, N.K. WardG, and K.C. Weathers. 2019. Closing the human-nature feedback loop: understanding people’s responses to changing lakes. LakeLine. 39(3):35-38. <Henson_etal_LakeLine_2019>

Little, J.C., E.T. Hester, S. Elsawah, G.M. Filz, A. Sandu, C.C. Carey, T. Iwanaga, and A.J. Jakeman. 2019. A tiered, system-of-systems modeling framework for resolving complex socio-environmental policy issues. Ecological Modelling and Software. Environmental Modelling & Software 112: 82-94. DOI. 10.1016/j.envsoft.2018.11.011 <Little_etal_2019_EM&S.pdf>


DoubekG, J.P., K.L. CampbellU, K. DoubekG, K.D. HamreG, M.E. LoftonG, R.P. McClureG, N.K. WardG, and C.C. Carey. 2018. The effects of hypolimnetic anoxia on the diel vertical migration of freshwater crustacean zooplankton. Ecosphere. 9(7):e02332. DOI: 10.1002/ecs2.2332 Open-access at:

FarrellP, K.J., and C.C. Carey. 2018. Power, pitfalls, and potential for integrating computational literacy into undergraduate ecology courses. Ecology and Evolution. 8:7744-7751. DOI: 10.1002/ece3.4363 Open access at:

HamreG, K.D., R.P. McClureG, Z.W. MungerG, J.P. DoubekG, A.B. GerlingG, M.E. Schreiber, and C.C. Carey. 2018. In situ fluorometry reveals a persistent, perennial hypolimnetic cyanobacterial bloom in a seasonally anoxic reservoir. Freshwater Science. 37:483-495. DOI: 10.1086/699327 <Hamre etal FWS _2018.pdf>

McClureG, R.P., K.D. HamreG, B.R. Niederlehner, Z.W. MungerG, S. ChenG, M.E. LoftonG, M.E. Schreiber, and C.C. Carey. 2018. Metalimnetic oxygen minimum zones decouple CH4 and CO2 fluxes from seasonal turnover. Science of the Total Environment. 636:610-620. DOI: 10.1016/j.scitotenv.2018.04.255

Mantzouki, E. and 194 co-authors, including C.C. Carey. 2018. A European Multi Lake Survey dataset of environmental parameters, phytoplankton pigments and cyanotoxins. Scientific Data. 5: 180226. DOI: 10.1038/sdata.2018.226 Mantzouki_etal_2018_SciData

Cobourn, K.M., C.C. Carey, K.J. Boyle, C. Duffy, H.A. Dugan, K.J. FarrellP, L. FitchettG, P.C. Hanson, J.A. HartG, V.R. Henson, A.L. HetheringtonP, A.R. Kemanian, L.G. Rudstam, L. ShuG, P.A. Soranno, M.G. Sorice, J. StachelekG, N.K. WardG, K.C. Weathers, W. WengG, and Y. ZhangG. 2018. From concept to practice to policy: modeling coupled natural and human systems in lake catchments. Ecosphere. 9(5):e02209. DOI: 10.1002/ecs2.2209 Open access at:

Carey, C.C., R.P. McClureG, J.P. DoubekG, M.E. LoftonG, N.K. WardG, and D. Scott. 2018. Chaoborus spp. transport CH4 from the sediments to the surface waters of a eutrophic reservoir, but their contribution to water column CH4 concentrations and diffusive efflux is minor. Environmental Science & Technology. 52:1165-1173. DOI 10.1021/acs.est.7b04384 <Carey_etal_2018_ES&T>

Leach, T.H., B.E. Beisner, C.C. Carey, P. Pernica, K.C. Rose, Y. Huot, J.A. Brentrup, I. Domaizon, H.-P. Grossart, B.W. Ibelings, P.T. Kelly, S. Jacquet, J.A. Rusak, J.D. Stockwell, D. Straile, and P. Verburg. 2018. Patterns and drivers of deep chlorophyll maxima structure in 100 lakes: the relative importance of light and thermal stratification. Limnology and Oceanography. 63:628-646 DOI: 10.1002/lno.10656 <Leach_et_al-2018-Limnology_and_Oceanography>

Carey, C.C., J.P. DoubekG, R.P. McClureG, and P.C. Hanson. Oxygen dynamics control the burial of organic carbon in a eutrophic reservoir. 2018. Limnology and Oceanography-Letters. 3:293-301. DOI: 10.1002/lol2.10057 <Carey_et_al-2018-Limnology_and_Oceanography_Letters>

ChenG, S., J.C. Little, C.C. Carey, R.P. McClureG, M.E. LoftonG, and C. Lei. Three-dimensional effects of artificial mixing in a shallow drinking-water reservoir. 2018. Water Resources Research. 54:425-441. DOI. 10.1002/2017WR021127 <Chen_et_al-2018-Water_Resources_Research>

ChenG, S., C.C. Carey, J.C. Little, M.E. LoftonG, R.P. McClureG, and C. Lei. 2018. Effectiveness of a bubble-plume mixing system for managing phytoplankton in lakes and reservoirs. Ecological Engineering. 113:43-51. DOI: 10.1016/j.ecoleng.2018.01.002 <Chen_etal_2018_EcolEngineering>

Mantzouki, E. and 194 co-authors, including C.C. Carey. 2018. Temperature effects explain continental scale distribution of cyanobacterial toxins. Toxins. 10(4):156. DOI: 10.3390/toxins10040156 <Open-access at>


Carey, C.C., B.L. Brown, and K.L. Cottingham. 2017. Cyanobacterial blooms increase the stability and network complexity of phytoplankton communities. Ecosphere. 8(7):e01830. DOI: 10.1002/ecs2.1830 <Carey_et_al-2017-Ecosphere>

Carey, C.C. and R.D. Gougis. 2017. Simulation modeling of lakes in undergraduate and graduate classrooms increases comprehension of climate change concepts and experience with computational tools.  Journal of Science Education and Technology. 26: 1-11. DOI: 10.1007/s10956-016-9644-2 <Carey&Gougis_2017_JSciEducTech>

Klug, J.L., C.C. Carey, D.C. Richardson, and R.D. Gougis. 2017. Analysis of high-frequency and long-term data in undergraduate ecology classes improves quantitative literacy. Ecosphere. 8(3):e01733 DOI: 10.1002/ecs2.1733 <Klug_et_al-2017-Ecosphere>

Subratie, K.G, S. Aditya, R. Figueiredo, C.C. Carey, and P. Hanson. 2017. GRAPLEr: A distributed collaborative environment for lake ecosystem modeling that integrates overlay networks, high-throughput computing, and web services. Concurrency and Computation: Practice and Experience. 29(13):e4139 DOI: 10.1002/cpe.4139 <Subratie_et_al-2017-Concurrency_and_Computation__Practice_and_Experience>

Hampton, S.E., A.W.E. Galloway, S.M. Powers, T. Ozersky, K.H. Woo, R.D. Batt, S.G. Laboo, C.M. O’Reilly, S. Sharma, N.R. Lottig, E.H. Stanley, R.L. North, J.D. Stockwell, R. Adrian, G.A. Weyhenmeyer, L. Arvola, H.M. Baulch, I. Bertani, L.L. Bowman, C.C. Carey, J. Catalan, W. Colom-Montero, L.M. Domine, M. Felip, I. Granados, C. Gries, H.-P. Grossart, J. Haberman, M. Haldna, B. Hayden, S.N. Higgins, J.C. Jolly, K.K. Kahilainen, E. Kaup, M.J. Kehoe, S. MacIntyre, A.W. Mackay, H.L. Mariash, R. M. McKay, B. Nixdorf, P. Noges, T. Noges, M. Palmer, D.C. Pierson, D.M. Post, M.J. Pruett, M. Rautio, J.S. Read, S.L. Roberts, J. Rucker, S. Sadro, E.A. Silow, D.E. Smith, R.W. Sterner, G.E.A. Swann, M.A. Timofeyev, M. Toro, M.R. Twiss, R.G. Vogt, S.B. Watson, E.J. Whiteford, and M.A. Xenopoulos. Ecology under lake ice. 2017. Ecology Letters. 20: 98-111. DOI: 10.1111/ele.12699 <Hampton_et_al-2017-Ecology_Letters>

Snortheim, C.A.G, P.C. Hanson, K.D. McMahon, J.S. Read, C.C. Carey, and H.A. Dugan. 2017. Meteorological drivers of hypolimnetic anoxia in a eutrophic, north temperate lake. Ecological Modelling. 343: 39-53. DOI: 10.1016/j.ecolmodel.2016.10.014 <Snortheim_etal_2017_EcolModelling>

O’Reilly, C.M., R.D. Gougis, J.L. Klug, C.C. Carey, D.C. Richardson, N.E. Bader, D.C. Soule, D. Castendyk, T. Meixner, J. Stromberg, K.C. Weathers, and W. Hunter. 2017. Using large datasets for open-ended inquiry in undergraduate science classrooms. Bioscience. 67:1052-1061. DOI: 10.1093/biosci/bix118 <OReilly_etal_2017_Bioscience>

Pauli, J.N., C.C. Carey, and M.Z. Peery. 2017. Green sloths and brown cows: the role of dominant mammalian herbivores in carbon emissions for tropical agro-ecosystems. Mammal Review. 47:164-168. DOI: 10.1111/mam.12086 <Pauli_et_al-2017-Mammal_Review>

Chen, S.G, C. Lei, C.C. Carey, P.A. Gantzer, and J.C. Little. 2017. Predicting hypolimnetic oxygenation and epilimnetic mixing in a shallow eutrophic reservoir using a coupled three-dimensional hydrodynamic model. Water Resources Research. 53: 470-484. DOI: 10.1002/2016WR019279 <Chen_et_al-2017-Water_Resources_Research>

HamreG, K.D., A.B. GerlingG, Z.W. MungerG, J.P. DoubekG, R.P. McClureG, K.L. Cottingham, and C.C. Carey. 2017. Spatial variation in dinoflagellate recruitment along a reservoir ecosystem continuum. 39:715-728 Journal of Plankton Research. DOI: 10.1093/plankt/fbx004 <Hamre_etal_JPR_2017>

Doubek, J.P.G, and C.C. Carey. 2017. Catchment, morphometric, and water quality characteristics differ between reservoirs and naturally formed lakes on a latitudinal gradient in the continental United States.  Inland Waters. 7:171-180DOI: 10.1080/20442041.2017.1293317 <Doubek&Carey_2017_InlandWaters>

Gougis, R.D., J.F. StrombergG, A. O’Hare, N.E. Bader, T. Meixner, C.M. O’Reilly, and C.C. Carey. 2017. Post-secondary science students’ explanations of randomness and variation and implications for science learning. International Journal of Science and Mathematics Education. 15:1039-1056. DOI: 10.1007/s10763-016-9737-7 <Gougis_etal_2017_IntJSciMathEd>

Richardson, D.C., C.C. Carey, D.A. Bruesewitz, and K.C. Weathers. 2017. Intra- and inter-annual variability in metabolism in an oligotrophic lake. Aquatic Sciences. 79:319-333. DOI: 10.1007/s00027-016-0499-7 <Richardson_etal_AquaticSci_2017>


Munger, Z.W.G, C.C. Carey, A.B. GerlingG, K.D. HamreG, J.P. DoubekG, S.D. KlepatzkiU, R.P. McClureG, and M.E. Schreiber. 2016. Effectiveness of hypolimnetic oxygenation for preventing accumulation of Fe and Mn in a drinking water reservoir. Water Research. 106: 1-14. DOI: 10.1016/j.watres.2016.09.038. <Munger_etal_2016_WaterRes>

Birgand, F., K. Aveni-Deforge, B. Smith, M. Horstman, B. MaxwellG, A.B. GerlingG, and C.C. Carey. 2016. First report of a novel multiplexer pumping system coupled to a water quality probe to collect high temporal frequency in situ water chemistry measurements at multiple sites. Limnology and Oceanography: Methods. 14: 767-783. DOI: 10.1002/lom3.10122. <Birgand_et_al_2016_Limnology_and_Oceanography_Methods>

Gerling, A.B.G, Z.W. MungerG, J.P. DoubekG, K.D. HamreG, P.A. Gantzer, J.C. Little, and C.C. Carey. 2016. Whole-catchment manipulations of internal and external loading reveal the sensitivity of a century-old reservoir to hypoxia. Ecosystems. 19:555-571. DOI: 10.1007/s10021-015-9951-0 <Gerling_etal_2016>

Carey, C.C., P.C. Hanson, R.C. Lathrop, and A.L. St. Amand. 2016. Using wavelet analyses to examine variability in phytoplankton seasonal succession and annual periodicity. Journal of Plankton Research. 38:27-40. DOI: 10.1093/plankt/fbv116 <Carey_etal._2016_JPR>

Little, J.C., E. Hester, and C.C. Carey. 2016. Assessing and enhancing environmental sustainability – a conceptual review. Environmental Science & Technology. 50: 6830-6845. DOI: 10.1021/acs.est.6b00298 <Little et al 2016 EST>

ChenG, S. C. Lei, C.C. Carey and J.C. Little. Modelling the effect of artificial mixing on thermal stability and substance transport in a drinking-water reservoir using a 3D hydrodynamic model. Proceedings of the 20th Australasian Fluid Mechanics Conference. Perth, Australia, 5-8 December 2016. <Chen_etal_2016_FluidMechanics>

Beisner, B.E. and C.C. Carey. Lake name or name lake? The etymology of lake nomenclature in the United States. Freshwater Biology. 61: 1601-1609. DOI: 10.1111/fwb.12795. <Beisner&Carey_2016_Freshwater_Biology>

ChenG, S., C. Lei, C.C. Carey and J.C. Little. Predicting the performance of an epilimnetic bubble-plume mixer in a shallow reservoir using a three-dimensional hydrodynamic model. Proceedings of the Australasian Heat and Mass Transfer Conference. Brisbane, Australia, July 2016. <Chen_etal_2016_AHMT>

Carey, C.C., and K.L. Cottingham. Cross-scale perspectives: Integrating long-term and high-frequency data into our understanding of communities and ecosystems. Bulletin of the Ecological Society of America. 97:129-132. DOI: 10.1002/bes2.1205 <Carey&Cottingham_2016_ESABulletin>


Hipsey, M.R., D.P. Hamilton, P.C. Hanson, C.C. Carey, J.Z. Coletti, J.S. Read, B.W. Ibelings, F. Valesini, and J.D. Brookes. Predicting the resilience and recovery of aquatic systems: a framework for model evolution within environmental observatories. Water Resources Research. 51:7023-7043. DOI: 10.1002/2015WR017175 <Hipsey_etal._2015_Water_Resources_Research>

Doubek, J.P.G, C.C. Carey, and B.J. Cardinale. Anthropogenic land use is associated with N-fixing cyanobacterial dominance in lakes across the continental United States. Aquatic Sciences. 77:681-694. DOI 10.1007/s00027-015-0411-x <Doubek_etal_2015_AquaticSci>

Bruesewitz, D.A., C.C. Carey, D.C. Richardson, and K.C. Weathers. Under-ice thermal stratification dynamics of a large, deep lake revealed by high-frequency data. Limnology & Oceanography. 60:347-359. DOI: 10.1002/lno.10014 <Bruesewitz_etal._2015>

Carey, C.C., R.D. Gougis, J.L. Klug, C.M. O’Reilly, and D.C. Richardson. A model for using environmental data-driven inquiry and exploration to teach limnology to undergraduates. Limnology & Oceanography Bulletin. 24:32-35. DOI: 10.1002/lob.10020 <Carey_et_al_LOB_2015>

Brookes, J.D., and C.C. Carey. Goal 6: Ensure availability and sustainable management of water and sanitation for all. United Nations Chronicle. 51(4):15-16. <Brookes_&_Carey_2015>

Sokol, E.R., B.L. Brown, C.C. Carey, B. TornwallG, C.M. Swan, and J.E. Barrett. Linking management to biodiversity in built ponds using metacommunity simulations. Ecological Modelling. 296:36-45. DOI:10.1016/j.ecolmodel.2014.10.022 <Sokol_et_al_2015>

Hansen, G.J.A.*, and C.C. Carey*. Fish and phytoplankton exhibit contrasting temporal species abundance patterns in a dynamic north temperate lake. PLOS One. 10(2): e0115414 DOI: 10.1371/journal.pone.0115414  <Hansen&Carey_PLOSOne_2015> *Both authors contributed equally to this work.

Cottingham, K.L., H.A. Ewing, M. Greer, C.C. Carey, and K.C. Weathers.  2015. Cyanobacteria as biological drivers of lake nitrogen and phosphorus cycling.  Ecosphere. 6(1):1 DOI: 10.1890/ES14-00174.1 <Cottingham et al 2015 Ecosphere>


Gerling, A.B.G, Browne, R.G.G, Gantzer, P.A., Mobley, M.H., Little, J.C., and C.C. Carey. 2014. First report of the successful operation of a side stream supersaturation hypolimnetic oxygenation system in a eutrophic, shallow reservoir.  Water Research. 67: 129-143. doi: 10.1016/j.watres.2014.09.002 <Gerling_etal_2014_WR>

Carey, C.C., K.L. Cottingham, N.G. Hairston, Jr., and K.C. Weathers.  2014. Trophic state mediates the effects of a large, colonial cyanobacterium on phytoplankton dynamics.  Fundamental and Applied Limnology. 184: 247-260. DOI: 10.1127/1863-9135/2014/0492 <Carey et al 2014 FAL>

Carey, C.C., K.C. Weathers, H.A. Ewing, M.L. Greer, and K.L. Cottingham. 2014. Spatial and temporal variability in recruitment of the cyanobacterium Gloeotrichia echinulata in an oligotrophic lake.  Freshwater Science.  33: 577-592. DOI: 10.1086/675734  *Chosen as the Featured Article of the issue <Carey_et_al_2014_FWS>

Carey, C.C., K.L. Cottingham, K.C. Weathers, J.A. BrentrupU, N.M. RuppertsbergerU, H.A. Ewing, and N.G. Hairston, Jr.  Facilitation in an oligotrophic lake: the cyanobacterium Gloeotrichia echinulata stimulates phytoplankton biomass, richness, and diversity.  2014. Journal of Plankton Research. 36:364-377. doi: 10.1093/plankt/fbt105  <Carey_etal_J. Plankton Res_2014>  *Cover article of the issue

Hamilton, D.P., C.C. Carey, L. Arvola, P. Arzberger, C. Brewer, J.J. Cole, E. Gaiser, P.C. Hanson, B.W. Ibelings, E. Jennings, T.K. Kratz, F.-P. Lin, C.G. McBride, D. de Motta Marques, K. Muraoka, A. Nishri, B. Qin, J.S. Read, K.C. Rose, E. Ryder, K.C. Weathers, G. Zhu, D. Trolle, and J.D. Brookes. 2014. A Global Lake Ecological Observatory Network (GLEON) for synthesising high-frequency sensor data for validation of deterministic ecological models. Inland Waters. 5: 49-56. DOI: 10.5268/IW-5.1.566 <Hamilton_etal_IW_2014>

Brookes, J.D., C.C. Carey, D.P. Hamilton, L. Ho, L. van der Linden, R. Renner, and A. Rigosi. 2014. Emerging challenges for the drinking water industry. Environmental Science & Technology. 48:2099-2101.  DOI: 10.1021/es405606t <Brookes_et_al_2014_ES&T>

Rigosi, A., C.C. Carey, B.W. Ibelings, and J.D. Brookes. 2014. The interaction between climate warming and eutrophication to promote cyanobacteria is dependent on trophic state and varies among taxa. Limnology and Oceanography.  59:99-114. DOI: 10.4319/lo.2014.59.01.0099 <Rigosi_etal_2014_L&O>

Pauli, J.N., J.E. Mendoza, S.A. Steffan, C.C. Carey, P.J. Weimer, and M.Z. Peery.  2014. A syndrome of mutualism reinforces the life history of a sloth.  Proceedings of the Royal Society B.  281: 20133006. DOI: 10.1098/rspb.2013.3006 <Proc. R. Soc. B_Pauli_etal_2014

Baustian, M.M., Hansen, G.J.A., de Kluijver, A., Robinson, K., Henry, E.N., Knoll, L.B., Rose, K.C., and C.C. Carey. 2014. Linking the bottom to the top in aquatic ecosystems: mechanisms and stressors of benthic-pelagic coupling, p. 25-47. In P.F. Kemp [ed.], Eco-DAS X Symposium Proceedings, ASLO. DOI: 10.4319/ecodas.2014.978-0-9845591-4-5.25 <Baustian_etal_2014>


Bertilsson, S., A. Burgin, C.C. Carey, S.B. Fey, H.-P. Grossart, L. Grubisic, I. Jones, G. Kirillin, J.T. Lennon, A. Shade, and R.L. Smyth. 2013. The under-ice microbiome of seasonally frozen lakes.  Limnology and Oceanography58:1998-2012. DOI: 10.4319/lo.2013.58.6.1998 <Bertilsson_et_al_UnderIceMicrobes_L&O_2013>

Weathers, K.C., P.C. Hanson, P. Arzberger, J. Brentrup, J. Brookes, C.C. Carey, E. Gaiser, D.P. Hamilton, G.S. Hong, B. Ibelings, E. Jennings, B. Kim, T. Kratz, F.-P. Lin, K. Muraoka, C. O’Reilly, C. Piccolo, K.C. Rose, G. Zhu. The Global Lake Ecological Observatory Network (GLEON): the evolution of grassroots network science. 2013. Limnology and Oceanography Bulletin. 22:71-73. <Weathers_etal_2013_L&O_Bulletin>


Carey, C.C., H.A. Ewing, K.L. Cottingham, K.C. Weathers, R.Q. Thomas, and J.F. Haney. 2012. Occurrence and toxicity of the cyanobacterium Gloeotrichia echinulata in low-nutrient lakes in the northeastern United States. Aquatic Ecology 46: 395–409 DOI: 10.1007/s10452-012-9409-9 <Carey_2012_Aquat Ecol>

Carey, C.C., B.W. Ibelings, E.P. Hoffman, D.P. Hamilton, and J.D. Brookes.  2012. Eco-physiological adaptations that favour freshwater cyanobacteria in a changing climate. Water Research. 46: 1394-1407. DOI: 10.1016/j.watres.2011.12.016 <Carey_2012_Water Res>

Capps, K.A., C.L. Atkinson, A. Rugenski, C. Baxter, K.S. Boersma, C.C. Carey, P.B. McIntyre, J.W. Moore, W.H. Nowlin, and C.C. Vaughn.  2012. Impacts of species addition and species loss on ecosystem function in freshwater systems.  Bulletin of the Ecological Society of America 93: 402-408. DOI: 10.1890/0012-9623-93.4.402 <Capps_2012_Bulletin of the Ecological Society of America>

Kara, E.L., P.C. Hanson, D.P. Hamilton, M. Hipsey, K.D. McMahon, J.S. Read, L. Winslow, J. Dedrick, K.C. Rose, C.C. Carey, S. Bertilsson, D. da Motta Marques, L. Beversdorf, T. Miller, C. Wu, Y.-F. Hsieh, E. Gaiser, and T.K. Kratz.  2012. Time-scale dependence in numerical simulations: assessment of physical, chemical, and biological predictions in a stratified lake at temporal from scales of hours to months. Environmental Modelling and Software. 35:104-121. DOI: 10.4319/lo.2013.58.6.1998 <Kara_2012_Environmental Modelling and Software>

Carey, C.C., P.C. Hanson, D.A. Bruesewitz, G.W. Holtgrieve, E.L. Kara, K.C. Rose, R.L. Smyth, and K.C. Weathers.  2012. Novel applications of high-frequency sensor data in aquatic ecosystems: discoveries from GLEON, the Global Lake Ecological Observatory Network. Bulletin of the Ecological Society of America.  93: 100-105. DOI: 10.1890/0012-9623-93.1.100  <Carey_2012_Bulletin of the Ecological Society of America>


Brookes, J.D.* and C.C. Carey*.  2011.  Resilience to blooms.  Science 334: 46-47. DOI: 10.1126/science.1207349 *Both authors contributed equally to this work.

Carey, C.C., and E. Rydin.  2011. Lake trophic status may be determined by the depth distribution of sediment phosphorus.  Limnology and Oceanography 56: 2051-2063. DOI: 10.4319/lo.2011.56.6.2051 <Carey_2011_Limnol Oceanogr>

Carey, C.C., M.P. Ching, S.M. Collins, A.M. Early, W.W. Fetzer, D. Chai, N.G. Hairston, Jr.  2011. Predator-dependent diel migration by Halocaridina rubra shrimp (Malacostraca: Atyidae) in Hawaiian anchialine pools. Aquatic Ecology 45: 35-41. DOI: 10.1007/s10452-010-9321-0 <Carey_2011_Aquat Ecol>


Carey, C.C. and K. Rengefors.  2010. The cyanobacterium Gloeotrichia echinulata stimulates algal division.  Journal of Plankton Research. 32: 1349-1354. DOI: 10.1093/plankt/fbq046 <Carey_2010_J Plankton Res>


Shade, A., C.C. Carey, E. Kara, S. Bertilsson, K.D. McMahon, and M.C. Smith.  2009. Can the black box be cracked?  The augmentation of microbial ecology with high-resolution, automated sensing technologies.  ISME Journal 3: 881-888. DOI: 10.1038/ismej.2009.56 <Shade_2009_IsmeJ>

Carey, C.C., Weathers, K.C., and K.L. Cottingham.  2009.  Increases in phosphorus at the sediment-water interface may accelerate the initiation of cyanobacterial blooms in an oligotrophic lake.  Verhandlungen der Internationalen Vereinigung der Limnologie. 30:1185-1188. <Carey_2009_Verh. Internat. Verein. Limnol>


Carey, C.C., Weathers, K.C., and K.L. Cottingham.  2008.  Gloeotrichia echinulata blooms in an oligotrophic lake:  Helpful insights from eutrophic lakes.  Journal of Plankton Research.  230: 893-904. DOI: 10.1093/plankt/fbn055 <Carey_2008_J Plankton Res>

Benson, B.J., Winslow, L.,  Arzberger, P., Carey, C.C., Fountain, T., Hanson, P.C., Kratz, T.K., and S. Tilak. 2008. Meeting the challenges of an international, grassroots organization of sites deploying sensor networks: the Global Lake Ecological Observatory Network (GLEON). Pages 33-38 in Gries, C. and M.B. Jones, eds. Proceedings of the Environmental Information Management 2008 Conference. <Benson_2008_Proceedings of the Environmental Information Management Conference 2008>


Carey, C.C., Haney, J.F., and K.L. Cottingham.  2007.  First report of microcystin-LR in Gloeotrichia echinulata.  Environmental Toxicology 22: 337-339.  DOI: 10.1002/tox.20245 <Carey_2007_Environ Toxicol>